FastQCFastQC Report
Thu 5 Oct 2023
SRR20458000_1_dedup_trimmed_paired.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR20458000_1_dedup_trimmed_paired.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences346417990
Total Bases51.3 Gbp
Sequences flagged as poor quality0
Sequence length36-150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)